Episode 1
Gintoki gives his suggestions to the editor and author of "Gintaman" on what should the series improve on.
Episode 2
A baby's dropped off in front of the Yorozuya; claming it's Gintoki's son.
Episode 3
Itou Kamotarou (appeared on the previous episode) proceeds with his agenda. Hijikata seeks help from the Yorozuya to save the Shinsengumi from destruction.
Episode 4
While trying to burn old JUMP issues, Gintoki is captured by a female fire fighter in search of a local arsonist.
Episode 5
A mother looking for her son in Edo enlists the help of Yorozuya.
Episode 6
Continuing from the last episode, it is discovered that the son turned out to be the No.1 "Pimp" in Kabuki District.
Episode 7
Terakado Tsu (Otsu) goes to be one day chief of the Shinsengumi to improve its image.
Episode 8
Mutsu requests the Yorozuya recover some stolen cargo.
Episode 9
A serial killer has been going around town-- and one of the crew meets him head on! In the meantime, Gintoki is requested to locate "Benizakura", an unlucky sword stolen from its owner.
Episode 10
Kagura gets captured. Tetsuko goes to visit the injured Gintoki and tells him the truth about the benisakura sword.
Episode 11
Shinpachi and Elizabeth go on the ship to attack Okada. A battle rages on the ship, at which Kagura manages to escape from captivity. On the other hand, Gintoki and Tetsuko (benisakura forger Tetsuya's sister) head towards Takasugi.
Episode 12
The battle comes to a conclusion, with benisakura finally taken over Okada's body, and Gintoki will have to use the sword Tetsuko gave him to stop this.
Episode 13
Yamasaki is sent by Hijikata to investigate what has happened with that fight between Katsura and Takasugi groups. He goes around asking different people, though fails to get any real answers.
Episode 14
Hattori Zenzo has been hired to kidnap a girl who is able to foresee the future. Meanwhile, the Yorozuya has been hired to protect the very same girl.
Episode 15
A set of TV crews follow Katsura around for a day to do a television program special interview.
Episode 16
Kagura's beetle was killed during a beetle fighting match. She tries to drag Gintoki and Shinpachi to go beetle hunting with her. That only succeeds when they know there is a high demand for the beetles - meaning they can make money of it. The trio encounters the Shinsengumi who also happens to be capturing beetles for reason unknown.
Episode 17
An old dango shop owner accepts a challenge from the owner of a popular new dessert shop.
Episode 18
Gintoki gets into an accident with a delivery girl who has the "Need for Speed". / As Gintoki recovers from the delivery incident, Sa-chan is forced to weigh both her feminine needs and her assassin duties when working a mission at the same hospital.
Episode 19
Every year during the Matsuri festival, a "Courage Test" event is held. This year Gintoki, Shinpachi and Kagura helps out in the event.
Episode 20
Kamenashi (the turtle) tells the group about Otohime, the owner of the Dragon Palace, that they are the only ones who are capable of stopping her plan.
Episode 21
The group goes to save Tae. On their way, Shinpachi, Gintoki and Katsura stumble upon a room where they learn about Otohime's past.
Episode 22
Otohime's past lover's will gives the antidote (to the aging virus) to Shinpachi. However, their time is limited as a missile carrying another batch of the aging virus, aimed at Edo, is about to be sent off.
Episode 23
Sadaharu is in "heat" and Yorozuya tries to find him a mate. / Katsura attempts to take a driving lesson-- a "Might Happen" driving lesson, that is.
Episode 24
Katsura goes undercover at an Amanto-only Japanese restaurant to stop a radical branch of the Joi Faction's plan of causing havoc. Meanwhile, Hasegawa takes over a sushi bar while the owner's at hospital. The Yorozuya ends up helping after the sushi machine went out of order.
Episode 25
Edo's under attack by M-unibrow zombies!
Episode 26
Gintoki, Shinpachi and Kagura recaps what has happened to date on their 2nd Year Anniversary special.
Episode 27
Otae's childhood friend, Kyubei Yagyu appears and takes Otae back to fufil her childhood promise.
Episode 28
Gintoki, Shinpachi, Kagura, Kondo, Hijikata and Sogo goes to the Yagyu family premises and attempts to get Otae back.
Episode 29
The battle at the Yagyu family premises continues.
Episode 30
Gintoki, Isao, Toujou, and Binbokusai are in the toilet, all looking for something to wipe....
Episode 31
The battle between Gintoki and Binbokusai begins; meanwhile, Shinpachi discovered that Kyubei was girl.
Episode 32
The final episode in the Yagyu story arc.
Episode 33
The Yorozuya attempt to rid a town of monsters for some quick cash / The piggish Amanto female saved by the Yorozuya from the drug pirates enlists them to save her boyfriend from his former gang.
Episode 34
The cold/flu season hits hard; Yorozuya is enlisted to help out at Otae's workplace.
Episode 35
A washed out detective tells his tale about his life-long quest of pursuing of a thief who turned from righteous to evil.
Episode 36
The detective, Gintoki, Shinpachi and Kagura crashed into a mansion in an attempt to capture the thief.
Episode 37
Sougo's older sister, Mitsuba, arrived in Edo for a visit. Hijikata and Mitsuba's relationship is revealed.
Episode 38
Mitsuba is in bad condition due to her sickness; Sougo decides to go help Hijikata.
Episode 39
Tojo Ayumu enlisted the help of Yorozuya to help make a "woman" out of the tomboyish Kyubei. Gintoki's solution: a Gokon.
Episode 40
The spirit of the sword that Gintoki carries appears to teach Gintoki, Shinpachi and Kagura an ultimate technique.
Episode 41
Gintoki, Shinpachi Kagura and Hasegawa are hospitalised (The Yorozuya gang for food poisoning from eating unfresh crabs; Hasegawa got knocked down by a car). They get themeslves involved when a young nurse falls in love with one of her patients.
Episode 42
Our female characters joined a "slimming" camp to shed off their extra weights.
Episode 43
An assassin has been hired to kill Matsudaira; but encounters unexpected scenerios while carrying out the task.
Episode 44
It's Valentine's Day, and a space heroine comes to Edo to confess her intention to...
Episode 45
Hasegawa gets a job. While commuting on his first day, an accident lands him in jail with harassment charges.
Episode 46
The trial of Hasegawa's harassment charge comes to a conclusion.
Episode 47
A planet's attacked by mysterious beings. It is up to Umi Bouzu to settle things and to out an end to the attacks. How will the end turn out?
Episode 48
Old gangmates of Catherine try to convince her to join them on a heist.
Episode 49
The popular game console "Owee" is finally on sale. The otaku, as well as the Yorozuya and the Shinsengumi are at the store trying to get their hands on the consoles.
Episode 50
Yorozuya and Shinsengumi are divided into two teams to play against each other in a video-gaming contest (for their chance to win free "Owee").