Episode 1
The Ki-Stone gifts Chizu, Kitsune and Gen with weapons, but they don't know why. Usagi makes himself their sensei and trains them to use their new gear.
Episode 2
The gang tries out a new fighting game at the arcade. Usagi vows to stop battling Yokai but later gets attacked by O-Dokuro, a Yokai-possessed skeleton.
Episode 3
Chizu challenges Lady Fuwa for control of the Neko Ninja Crew. Usagi and Gen plan a party for Kitsune when they learn she's never celebrated a birthday,
Episode 4
Usagi and Gen volunteer to show the ninja kids that there's a lot more to life outside the dojo. The Bat Squadron attacks the temple.
Episode 5
After Kagehito warns of the coming Makkine invasion, the gang sets out to recruit the ninja and Mogura as allies. Lady Fuwa plots revenge against Chizu.
Episode 6
Kagehito needs the team's help to retrieve a precious item. Makkine warbottos are appearing all over town… but where are they coming from?
Episode 7
O-Dokuro leads the team to an ancient battlefield, where Usagi hopes to retrieve his ancestor's sword to cut off the approaching invasion.
Episode 8
Tetsujin debuts his defensebotto but needs someone to drive it. Chizu confronts Lady Fuwa in a final fight to lead the Neko Ninja Crew.
Episode 9
Kagehito realizes what Kitsune's pet egg really is. An ill-timed attack by the Bat Squadron leads to disaster, allowing the Makkine to invade.
Episode 10
All of Neo Edo must come together to fight as the Makkine send a giant monster and an army of warbottos through the gateway. Can the city be saved?